Proteinbioinformatics analysis of the Hcp gene and construction of prokaryotic expression vector in Acinetobacter baumannii strain 5075

  • DING Ruipei ,
  • MU Ruxue ,
  • ZHANG Yu ,
  • LI Zilong ,
  • LI Liuyan ,
  • WANG Yilin ,
  • YE Ying ,
  • HE Maozhang
Expand
  • 1. Department of Microbiology, School of Basic Medical Sciences, Anhui Medical University, Hefei 230032, China;
    2. Department of Infection, the First Affiliated Hospital of Anhui Medical University

Received date: 2025-02-28

  Online published: 2025-10-11

Abstract

Objective: To construct a prokaryotic expression vector for the hemolysin co-regulated protein (Hcp) gene from Acinetobacter baumannii strain 5075, and to achieve high-efficiency expression and purification of the protein. Methods: Based on the bioinformatics analysis of Hcp protein, the target gene was amplified by PCR. The target fragment and pET-28a(+) plasmid were digested with BamHⅠ and XhoⅠ, ligated and transformed into E.coli DH5α, and screened on LB solid medium containing kanamycin. Single colonies were randomly selected for colony PCR identification and sequencing. The recombinant plasmid pET-28a(+)-Hcp was transformed into E.coli BL21 (DE3) again to explore the suitable induction conditions. The expression of Hcp protein was induced by IPTG at 37 ℃ and 18 ℃, respectively, and the target protein was purified by BeyoMagTM His tag protein purification agarose magnetic beads (NTA-Ni). Results: The bioinformatics analysis of Hcp protein showed that the Ab5075_Hcp gene from A. baumannii encodes 167 amino acids, with a protein formula of C833H1278N228O260S3, the theoretical protein molecular weight was 18.7 kDa, the protein isoelectric point was 6.52, the instability index was 32.86, the aliphatic index was 67.13, and the average hydrophilicity was -0.625, which was a hydrophilic stable protein. There was no transmembrane region and signal peptide, and the sequence is highly conserved. The secondary structure mainly had regular curl and extension chain. Hcp protein was located in the nucleus and had five potential B cell epitopes. In this study, the prokaryotic expression vector of Hcp gene was successfully constructed, and a large amount of soluble Hcp protein was purified after induction expression. The optimal induction conditions were IPTG 0.5 mmol/L and induction at 18 ℃ for 15-16 h. Conclusion: The Ab5075_Hcp protein of Acinetobacter baumannii is within a reasonable range of predicted values and has a good purification effect, which is suitable for the preparation of antibodies and candidate vaccines.

Cite this article

DING Ruipei , MU Ruxue , ZHANG Yu , LI Zilong , LI Liuyan , WANG Yilin , YE Ying , HE Maozhang . Proteinbioinformatics analysis of the Hcp gene and construction of prokaryotic expression vector in Acinetobacter baumannii strain 5075[J]. Journal of Baotou Medical College, 2025 , 41(9) : 33 -41 . DOI: 10.16833/j.cnki.jbmc.2025.09.006

References

[1] Lee CR, Lee JH, Park M, et al. Biology of Acinetobacter baumannii: pathogenesis, antibiotic resistance mechanisms, and prospective treatment options[J]. Front Cell Infect Microbiol, 2017,7:55.
[2] Whiteway C, Breine A, Philippe C, et al. Acinetobacter baumannii[J]. Trends Microbiol, 2022,30(2):199-200.
[3] Giammanco A, Calà C, Fasciana T, et al. Global assessment of the activity of tigecycline against multidrug-resistant gram-negative pathogens between 2004 and 2014 as part of the tigecycline evaluation and surveillance trial[J]. mSphere, 2017,2(1):e00310-16.
[4] Antunes LCS, Visca P, Towner KJ. Acinetobacter baumannii: evolution of a global pathogen[J]. Pathog Dis, 2014,71(3):292-301.
[5] Kandolo O, Cherrak Y, Filella Merce I, et al. Acinetobacter type VI secretion system comprises a non-canonical membrane complex[J]. PLoS Pathog, 2023,19(9):e1011687.
[6] Repizo GD, Gagné S, Foucault Grunenwald ML, et al. Differential role of the T6SS in Acinetobacter baumannii virulence[J]. PLoS One, 2015,10(9):e0138265.
[7] 王海蓉, 宁年智, 王慧. 鲍曼不动杆菌Ⅵ型分泌系统功能蛋白的研究及应用新进展[J]. 微生物学报, 2024, 64(2): 391-407.
[8] Hu YY, Chen S, Zhang YD, et al. Value of T6SS core gene hcp in Acinetobacter baumannii respiratory tract infection[J]. Indian J Microbiol, 2023,63(3):291-298.
[9] 胡音音. 鲍曼不动杆菌溶血素共调节蛋白hcp基因及其致病性相关研究[D]. 温州: 温州医科大学, 2018.
[10] 董俊芳, 王萍, 刘存伟, 等. 鲍曼不动杆菌无痕基因敲除及hcp基因相关功能[J]. 微生物学通报, 2021, 48(3): 811-819.
[11] Shi JC, Cheng JH, Liu SR, et al. Acinetobacter baumannii: an evolving and cunning opponent[J]. Front Microbiol, 2024,15:1332108.
[12] Muno Price LS, Weinstein RA. Acinetobacter infection[J]. N Engl J Med, 2008,358(12):1271-1281.
[13] Ayoub Moubareck C, Hammoudi Halat D. Insights into Acinetobacter baumannii: a review of microbiological, virulence, and resistance traits in a threatening nosocomial pathogen[J]. Antibiotics (Basel), 2020,9(3):119.
[14] Teerawattanapong N, Panich P, Kulpokin D, et al. A systematic review of the burden of multidrug-resistant healthcare-associated infections among intensive care unit patients in Southeast Asia: the rise of multidrug-resistant Acinetobacter baumannii[J]. Infect Control Hosp Epidemiol, 2018,39(5):525-533.
[15] Ibrahim S, Al Saryi N, Al Kadmy IMS, et al. Multidrug-resistant Acinetobacter baumannii as an emerging concern in hospitals[J]. Mol Biol Rep, 2021,48(10):6987-6998.
[16] Dong JF, Liu CW, Wang P, et al. The type VI secretion system in Acinetobacter baumannii clinical isolates and its roles in antimicrobial resistance acquisition[J]. Microb Pathog, 2022,169:105668.
[17] Weber BS, Miyata ST, Iwashkiw JA, et al. Genomic and functional analysis of the type VI secretion system in Acinetobacter[J]. PLoS One, 2013,8(1):e55142.
[18] Li P, Zhang SR, Wang JD, et al. The role of type VI secretion system genes in antibiotic resistance and virulence in Acinetobacter baumannii clinical isolates[J]. Front Cell Infect Microbiol, 2024,14:1297818.
[19] Lin L, Capozzoli R, Ferrand A, et al. Subcellular localization of Type VI secretion system assembly in response to cell-cell contact[J]. EMBO J, 2022,41(13):e108595.
Outlines

/